BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D07SP1|AL425687
(754 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1462 0.0
>3x_Contig1800
Length = 38778
Score = 1462 bits (733), Expect = 0.0
Identities = 747/755 (98%), Gaps = 1/755 (0%)
Strand = Plus / Minus
Query: 1 gatcatgtaagtggtgtcaacttcaacgttggtgatgttggtagcgtta-caacaatttc 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 14590 gatcatgtaagtggtgtcaacttcaacgttggtgatgttggtagcgttagcaacaatttc 14531
Query: 60 caaaacattggcgtcaccatcgtgtctacctaaatgaggcaaatcccagttggcttcaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14530 caaaacattggcgtcaccatcgtgtctacctaaatgaggcaaatcccagttggcttcaac 14471
Query: 120 actagccaattgagagtmatggtcatagaaagtatcatccttggtacccttcaattcatc 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14470 actagccaattgagagtaatggtcatagaaagtatcatccttggtacccttcaattcatc 14411
Query: 180 tgggataacgccacccaacaagatggagaagaccttgttcttgataccataggtttcatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14410 tgggataacgccacccaacaagatggagaagaccttgttcttgataccataggtttcatt 14351
Query: 240 ttcatcgaaggtcaacaagaccaaagtgtcctccatgaagtaatcgttttctaataatgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14350 ttcatcgaaggtcaacaagaccaaagtgtcctccatgaagtaatcgttttctaataatgg 14291
Query: 300 agccaagaagtcctttgaccatttaccagcmaattggatagtggtgtcatgaccatcgtt 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 14290 agccaagaagtcctttgaccatttaccagcaaattggatagtggtgtcatgaccatcgtt 14231
Query: 360 agtcatatttggagtvatgamagcgtattgaggtaacttttcgttttctacgtcattgtt 419
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 14230 agtcatatttggagtaatgaaagcgtattgaggtaacttttcgttttctacgtcattgtt 14171
Query: 420 gamatcttcaaagttcttaatgttagccaaacgagtatcgttgttgacaacgttatcgaa 479
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14170 gaaatcttcaaagttcttaatgttagccaaacgagtatcgttgttgacaacgttatcgaa 14111
Query: 480 caaaatcaatgggttatgttttctgacataatcactggcgtatgtctcttggttagagaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14110 caaaatcaatgggttatgttttctgacataatcactggcgtatgtctcttggttagagaa 14051
Query: 540 gttcataccttggaaaccagcatatggagagtgttcttggtattcagcccaagagatacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14050 gttcataccttggaaaccagcatatggagagtgttcttggtattcagcccaagagatacc 13991
Query: 600 cttagtgtccaacaaatcaacgatgttagacacattggatggcatagaaatmmatctgtc 659
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 13990 cttagtgtccaacaaatcaacgatgttagacacattggatggcatagaaataaatctgtc 13931
Query: 660 atcatccaaggcgaagtaatcaccaccgacagaagccaaatagtttggttctgaagggtg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13930 atcatccaaggcgaagtaatcaccaccgacagaagccaaatagtttggttctgaagggtg 13871
Query: 720 agtcaaagcccagtagttggtcaaggtaatacctt 754
|||||||||||||||||||||||||||||||||||
Sbjct: 13870 agtcaaagcccagtagttggtcaaggtaatacctt 13836
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5152
Number of Sequences: 1807
Number of extensions: 5152
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 754
length of database: 10,358,551
effective HSP length: 16
effective length of query: 738
effective length of database: 10,329,639
effective search space: 7623273582
effective search space used: 7623273582
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)